1. Species Heterobothrium aljufailiae Ogawa & Itoh, 2022
2. Species Heterobothrium bychowskyi Ogawa, 1991
3. Species Heterobothrium ecuadori Meserve, 1938
4. Species Heterobothrium elongatum Williams, 1986
5. Species Heterobothrium gotoi Ogawa & Itoh, 2022
6. Species Heterobothrium indicum Verma, 2021
7. Species Heterobothrium iwatai Ogawa & Itoh, 2022
8. Species Heterobothrium lamothei Vidal-Martínez & Mendoza-Franco, 2008
9. Species Heterobothrium lineatum Morsy, Saady, Abdel-Gaffar, Bashtar, Melhorn, Al Quraishy & Adel, 2012
10. Species Heterobothrium matsubarai Ogawa & Itoh, 2022
11. Species Heterobothrium okamotoi Ogawa, 1991
12. Species Heterobothrium praeorchis Bychowsky & Nagibina, 1976
13. Species Heterobothrium shinagawai Ogawa, 1991
14. Species Heterobothrium tabetai Ogawa & Itoh, 2022
15. Species Heterobothrium tetrodonis (Goto, 1894) Bychowsky & Nagibina, 1976
16. Species Heterobothrium tonkinense Bychowsky, Mamaev & Nagibina, 1976
17. Species Heterobothrium torquigeneri Williams, 1986
18. Species Heterobothrium victorwepeneri Acosta & Smit, 2021
19. Species Heterobothrium yamagutii Ogawa, 1991
20. Species Heterobothrium affinis (Linton, 1898) Price, 1936 accepted as Choricotyle affine (Linton, 1898) Llewellyn, 1941 accepted as Dactylocotyle affinis (Linton, 1898) Brinkmann, 1942 accepted as Neoheterobothrium affine (Linton, 1898) Price, 1943 (Superseded combination)
21. Species Heterobothrium exilis (Crane, 1972) Mamaev, 1987 accepted as Paraheterobothrium exile (Crane, 1972) Ogawa, Itoh & Oliva, 2021 (Superseded combination)
22. Species Heterobothrium galapagense Meserve, 1938 accepted as Tagia galapagensis (Meserve, 1938) accepted as Hemitagia galapagensis (Meserve, 1938) Sproston, 1946 (Superseded combination)
23. Species Heterobothrium indicus Verma, 2021 accepted as Heterobothrium indicum Verma, 2021 (Malformed suffix)
24. Species Heterobothrium lineatus lineatus Morsy, Saady, Abdel-Ghaffar, Bashtar, Mehlhorn, Al Quraishy & Adel, 2012 accepted as Heterobothrium lineatum Morsy, Saady, Abdel-Gaffar, Bashtar, Melhorn, Al Quraishy & Adel, 2012 (Malformed suffix)
25. Species Heterobothrium minimum (MacCallum, 1916) Sproston, 1946 accepted as Heterocotyle minima (MacCallum, 1916) Price, 1938 (Superseded combination)
26. Species Heterobothrium tonkinensis Bychowsky & Nagibina, 1976 accepted as Heterobothrium tonkinense Bychowsky, Mamaev & Nagibina, 1976 (unaccepted > incorrect grammatical agreement of specific epithet)

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